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  5. LOC_Os10g39540.1

LOC_Os10g39540.1 (LOC_Os10g39540)


Aliases : LOC_Os10g39540

Description : transcription factor (DBP). clade G phosphatase


Gene families : OG0000632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000632_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g39540.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g023377 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51622 No alias clade G phosphatase *(DBP) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g22591 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G036500.1 Ceric.17G036500 clade G phosphatase *(DBP) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G001300.1 AtDBP1, DBP1,... clade G phosphatase *(DBP) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01028192001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.01 OrthoFinder output from all 47 species
Gb_16142 No alias transcription factor (DBP). clade G phosphatase 0.01 OrthoFinder output from all 47 species
LOC_Os01g19130.1 LOC_Os01g19130 transcription factor (DBP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g39600.1 AtDBP1, DBP1,... transcription factor (DBP) 0.06 OrthoFinder output from all 47 species
Len_g08148 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000643 No alias clade G phosphatase *(DBP) & original description: CDS=685-1845 0.01 OrthoFinder output from all 47 species
Sam_g07104 No alias clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g082490.4.1 Solyc02g082490 transcription factor (DBP). clade G phosphatase 0.03 OrthoFinder output from all 47 species
Tin_g27710 No alias clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025432_P001 Zm00001e025432 transcription factor (DBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 36 286
No external refs found!