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  5. LOC_Os10g38212.1

LOC_Os10g38212.1 (NDHJ, LOC_Os10g38212)


Aliases : NDHJ, LOC_Os10g38212

Description : component NdhJ of NDH subcomplex A


Gene families : OG0010313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g38212.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00014280 PSBG,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
ATCG00420 NDHJ NADH dehydrogenase subunit J 0.5 OrthoFinder output from all 47 species
Aev_g09764 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.46 OrthoFinder output from all 47 species
Als_g14163 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Aob_g00848 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Ceric.02G013700.1 NDHJ, Ceric.02G013700 component *(NdhJ) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G092500.1 NDHJ, Ceric.07G092500 not classified & original description: pacid=50627119... 0.12 OrthoFinder output from all 47 species
Ceric.09G048100.1 NDHJ, Ceric.09G048100 component *(NdhJ) of NDH subcomplex A & original... 0.32 OrthoFinder output from all 47 species
Ceric.27G005900.1 NDHJ, Ceric.27G005900 component *(NdhJ) of NDH subcomplex A & original... 0.32 OrthoFinder output from all 47 species
Ceric.29G033000.1 NDHJ, Ceric.29G033000 not classified & original description: pacid=50625359... 0.04 OrthoFinder output from all 47 species
Lfl_g17288 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.25 OrthoFinder output from all 47 species
Ore_g10963 NDHJ component *(NdhJ) of NDH subcomplex A & original... 0.26 OrthoFinder output from all 47 species
Solyc00g500061.1.1 NDHJ, Solyc00g500061 component NdhJ of NDH subcomplex A 0.44 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001268 NADH_UbQ_OxRdtase_30kDa_su 31 149
No external refs found!