LOC_Os02g38950.1


Description : Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana (sp|q9m8w9|pp211_arath : 449.0)


Gene families : OG_01_0000152 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000152_tree ,
OG_02_0000102 (LandPlants) Phylogenetic Tree(s): OG_02_0000102_tree ,
OG_03_0005041 (SeedPlants) Phylogenetic Tree(s): OG_03_0005041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g38950.1
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00228510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13420,... 0.02 Archaeplastida
AT1G20300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
AT1G77360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01008815001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 Archaeplastida
GSVIVT01015982001 No alias Pentatricopeptide repeat-containing protein At1g80880,... 0.03 Archaeplastida
GSVIVT01017293001 No alias Pentatricopeptide repeat-containing protein At1g52640,... 0.03 Archaeplastida
GSVIVT01027388001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.03 Archaeplastida
LOC_Os06g31300.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_14956g0020 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 Archaeplastida
MA_355286g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.03 Archaeplastida
Solyc01g007267.1.1 No alias Pentatricopeptide repeat-containing protein At3g49730... 0.03 Archaeplastida
Solyc04g081950.4.1 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.02 Archaeplastida
Solyc11g070040.3.1 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.06 Archaeplastida
Zm00001e036197_P001 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.02 Archaeplastida
AMTR_s00047p00228510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13420,... 0.02 LandPlants
AMTR_s00119p00029960 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g15010,... 0.02 LandPlants
AT1G20300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 LandPlants
AT1G77360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
GSVIVT01014289001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
GSVIVT01015982001 No alias Pentatricopeptide repeat-containing protein At1g80880,... 0.03 LandPlants
GSVIVT01017293001 No alias Pentatricopeptide repeat-containing protein At1g52640,... 0.02 LandPlants
GSVIVT01027388001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.03 LandPlants
MA_355286g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.03 LandPlants
Solyc01g007267.1.1 No alias Pentatricopeptide repeat-containing protein At3g49730... 0.03 LandPlants
Solyc03g116540.1.1 No alias Pentatricopeptide repeat-containing protein At1g52640,... 0.02 LandPlants
Solyc04g081950.4.1 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.02 LandPlants
Solyc11g070040.3.1 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 LandPlants
Zm00001e006773_P001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.02 LandPlants
Zm00001e028873_P001 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.02 LandPlants
Zm00001e036197_P001 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 359 403
IPR002885 Pentatricopeptide_repeat 243 297
IPR002885 Pentatricopeptide_repeat 319 348
IPR002885 Pentatricopeptide_repeat 431 459
IPR002885 Pentatricopeptide_repeat 187 208
IPR002885 Pentatricopeptide_repeat 118 147
No external refs found!