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  5. LOC_Os10g36190.1

LOC_Os10g36190.1 (LOC_Os10g36190)


Aliases : LOC_Os10g36190

Description : Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana (sp|q7x6a5|ppr81_arath : 536.0)


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g36190.1
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
Aev_g17218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017293001 No alias Pentatricopeptide repeat-containing protein At1g52640,... 0.09 OrthoFinder output from all 47 species
MA_86400g0010 No alias Pentatricopeptide repeat-containing protein At5g18390,... 0.05 OrthoFinder output from all 47 species
Sam_g37457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013118_P001 Zm00001e013118 Pentatricopeptide repeat-containing protein At3g61360... 0.02 OrthoFinder output from all 47 species
Zm00001e036305_P001 Zm00001e036305 Pentatricopeptide repeat-containing protein At3g25210,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 448 492
IPR002885 Pentatricopeptide_repeat 360 388
IPR002885 Pentatricopeptide_repeat 184 213
IPR002885 Pentatricopeptide_repeat 285 332
IPR002885 Pentatricopeptide_repeat 390 438
No external refs found!