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  5. LOC_Os10g36060.1

LOC_Os10g36060.1 (LOC_Os10g36060)


Aliases : LOC_Os10g36060

Description : no hits & (original description: none)


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g36060.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G22060 No alias LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures;... 0.05 OrthoFinder output from all 47 species
AT5G41140 No alias Myosin heavy chain-related protein 0.1 OrthoFinder output from all 47 species
AT5G52280 No alias Myosin heavy chain-related protein 0.05 OrthoFinder output from all 47 species
Adi_g011579 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g17663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08401 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g33047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20829.t1 Aspi01Gene20829 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013305 No alias not classified & original description: CDS=603-4352 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g014174 No alias not classified & original description: CDS=345-4727 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023862 No alias not classified & original description: CDS=554-2527 0.02 OrthoFinder output from all 47 species
Dac_g01793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.1 OrthoFinder output from all 47 species
GSVIVT01019782001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01028978001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_26931 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27516 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g39950.1 LOC_Os10g39950 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03505 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431386g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_123836g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9751268g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g12160.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g37092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g51455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018217 No alias not classified & original description: CDS=840-4208 0.04 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc08g080780.4.1 Solyc08g080780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g04859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.24 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e037927_P004 Zm00001e037927 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 16 138
No external refs found!