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  5. LOC_Os10g35380.1

LOC_Os10g35380.1 (LOC_Os10g35380)


Aliases : LOC_Os10g35380

Description : cohesin cofactor (WAPL)


Gene families : OG0002929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g35380.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AT1G11060 No alias WAPL (Wings apart-like protein regulation of... 0.04 OrthoFinder output from all 47 species
Ala_g03756 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10189 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14488 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11536 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22100.t1 Aspi01Gene22100 cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0559.g076927 No alias cohesin cofactor *(WAPL) & original description: CDS=93-2768 0.07 OrthoFinder output from all 47 species
Cba_g27612 No alias cohesin cofactor *(WAPL) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.32G063200.1 Ceric.32G063200 cohesin cofactor *(WAPL) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g32930 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22746 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04943 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g11280.1 No alias cohesin cofactor (WAPL) 0.03 OrthoFinder output from all 47 species
Msp_g14133 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11391 No alias cohesin cofactor *(WAPL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28954 No alias cohesin cofactor *(WAPL) & original description: none 0.02 OrthoFinder output from all 47 species
Smo443608 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Solyc02g078560.4.1 Solyc02g078560 cohesin cofactor (WAPL) 0.04 OrthoFinder output from all 47 species
Zm00001e004474_P004 Zm00001e004474 cohesin cofactor (WAPL) 0.04 OrthoFinder output from all 47 species
Zm00001e012602_P001 Zm00001e012602 cohesin cofactor (WAPL) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR022771 WAPL_C 104 688
No external refs found!