Aliases : ATLIG1, LIG1, LOC_Os10g34750
Description : DNA replication DNA ligase (LIG1). DNA ligase (LIG1)
Gene families : OG0001904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os10g34750.1 | |
Cluster | HCCA: Cluster_65 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00064p00189190 | ATLIG1, LIG1,... | Enzyme classification.EC_6 ligases.EC_6.5 ligase forming... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g057159 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g109165 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g20608 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g01152 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01031470001 | ATLIG1, LIG1 | DNA damage response.DNA repair mechanisms.base excision... | 0.04 | OrthoFinder output from all 47 species | |
Len_g30745 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g18058 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g48441 | AtLIG6, LIG6 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g48452 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g066370.2.1 | ATLIG1, LIG1,... | DNA replication DNA ligase (LIG1). DNA ligase (LIG1) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g07751 | ATLIG1, LIG1 | EC_6.5 ligase forming phosphoric ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e020139_P002 | AtLIG6, LIG6,... | DNA ligase (LIG6) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003910 | DNA ligase (ATP) activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006281 | DNA repair | IEA | Interproscan |
BP | GO:0006310 | DNA recombination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
No external refs found! |