1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g34540.1

LOC_Os10g34540.1 (AtTPR1, TPR1, LOC_Os10g34540)


Aliases : AtTPR1, TPR1, LOC_Os10g34540

Description : no hits & (original description: none)


Gene families : OG0004518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004518_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g34540.1

Target Alias Description ECC score Gene Family Method Actions
Cre02.g075100 AtTPR1, TPR1 No description available 0.03 OrthoFinder output from all 47 species
Spa_g49403 AtTPR1, TPR1 regulatory protein *(TRP1) of ethylene receptor activity... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013105 TPR_2 140 172
IPR001440 TPR_1 107 138
No external refs found!