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  5. LOC_Os10g33970.1

LOC_Os10g33970.1 (DRB2, LOC_Os10g33970)


Aliases : DRB2, LOC_Os10g33970

Description : Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica (sp|q9av50|drb6_orysj : 726.0)


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g33970.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00199170 DRB3,... Double-stranded RNA-binding protein 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT3G62800 DRB4 double-stranded-RNA-binding protein 4 0.03 OrthoFinder output from all 47 species
Adi_g056885 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Als_g07433 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Als_g19830 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05097 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29074.t1 DRB3, Aspi01Gene29074 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046351 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Cba_g26876 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09247 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g03778 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g09465 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43801 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01059 DRB5 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Ehy_g05617 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ehy_g28214 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025192001 DRB2 Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os12g01916.1 DRB1, HYL1,... component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.04 OrthoFinder output from all 47 species
MA_693782g0010 DRB1, HYL1 component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.03 OrthoFinder output from all 47 species
Pir_g03363 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11340 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pir_g37490 DRB4 component *(DRB4) of DRB4-DRB7.1 siRNA biogenesis... 0.04 OrthoFinder output from all 47 species
Ppi_g59217 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015395 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Tin_g21099 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 88 153
IPR014720 dsRBD_dom 2 68
No external refs found!