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  5. LOC_Os10g33960.1

LOC_Os10g33960.1 (IFL1, IFL, REV, LOC_Os10g33960)


Aliases : IFL1, IFL, REV, LOC_Os10g33960

Description : transcription factor (HD-ZIP III)


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g33960.1

Target Alias Description ECC score Gene Family Method Actions
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.02 OrthoFinder output from all 47 species
Adi_g130173 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36023 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37323 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06579 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22007 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22860 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G016600.1 IFL1, IFL, REV,... not classified & original description: pacid=50578535... 0.04 OrthoFinder output from all 47 species
Dcu_g19909 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025193001 IFL1, IFL, REV RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Len_g10334 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427484g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006550 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original... 0.02 OrthoFinder output from all 47 species
Smo270225 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Solyc08g066500.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
Spa_g08598 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR013978 MEKHLA 697 839
IPR001356 Homeobox_dom 29 87
IPR002913 START_lipid-bd_dom 167 374
No external refs found!