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  5. LOC_Os10g33660.1

LOC_Os10g33660.1 (VPS2.3, LOC_Os10g33660)


Aliases : VPS2.3, LOC_Os10g33660

Description : component VPS2/CHMP2 of ESCRT-III complex


Gene families : OG0003140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g33660.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene00964.t1 VPS2.3, Aspi01Gene00964 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Cre17.g735400 VPS2.3 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Mp5g06990.1 VPS2.3 component VPS2/CHMP2 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015157 VPS2.2 component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g30316 No alias component *(VPS2/CHMP2) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e004586_P001 VPS2.3, Zm00001e004586 component VPS2/CHMP2 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 185
No external refs found!