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  5. LOC_Os10g32970.1

LOC_Os10g32970.1 (LSP, LSP1,...)


Aliases : LSP, LSP1, EIF(ISO)4E, EIF4E2, eIFiso4E, LOC_Os10g32970

Description : component eIF-iso4E of eIF-iso4F unwinding complex


Gene families : OG0001969 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001969_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g32970.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g011319 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0368.g067043 EIF4E, CUM1,... not classified & original description: CDS=117-755 0.03 OrthoFinder output from all 47 species
Dac_g09181 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Mp1g06030.1 EIF4E, CUM1,... component eIF4E of eIF4F mRNA unwinding complex.... 0.03 OrthoFinder output from all 47 species
Spa_g15124 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species
Tin_g00239 EIF4E, CUM1,... component *(eIF-iso4E) of eIF-iso4F unwinding complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 32 186
No external refs found!