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  5. LOC_Os10g32740.1

LOC_Os10g32740.1 (LOC_Os10g32740)


Aliases : LOC_Os10g32740

Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana (sp|q9lta6|wav3_arath : 178.0)


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g32740.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 OrthoFinder output from all 47 species
AT2G22680 No alias Zinc finger (C3HC4-type RING finger) family protein 0.05 OrthoFinder output from all 47 species
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.01 OrthoFinder output from all 47 species
AT4G37890 EDA40 Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.05 OrthoFinder output from all 47 species
Aev_g04114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G014600.1 Ceric.24G014600 not classified & original description: pacid=50629291... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000605.6 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000802.25 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g500550 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g04921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009240001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_07921 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g40664.1 LOC_Os02g40664 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g01160.1 LOC_Os04g01160 ubiquitin protein ligase (WAV3) 0.03 OrthoFinder output from all 47 species
LOC_Os08g03270.1 LOC_Os08g03270 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g15586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g030310.1.1 Solyc02g030310 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc02g091710.3.1 Solyc02g091710 ubiquitin protein ligase (WAV3) 0.03 OrthoFinder output from all 47 species
Solyc04g076860.3.1 Solyc04g076860 ubiquitin protein ligase (WAV3) 0.01 OrthoFinder output from all 47 species
Spa_g14647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000344_P001 Zm00001e000344 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e010994_P001 Zm00001e010994 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012729_P001 Zm00001e012729 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e025740_P001 Zm00001e025740 Probable E3 ubiquitin-protein ligase EDA40... 0.02 OrthoFinder output from all 47 species
Zm00001e040514_P001 Zm00001e040514 ubiquitin protein ligase (WAV3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032838 Vwaint_dom 611 683
IPR002035 VWF_A 261 447
IPR001841 Znf_RING 70 115
No external refs found!