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  5. LOC_Os10g32710.1

LOC_Os10g32710.1 (LOC_Os10g32710)


Aliases : LOC_Os10g32710

Description : no hits & (original description: none)


Gene families : OG0006328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g32710.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g008548 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Aspi01Gene60060.t1 Aspi01Gene60060 substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ceric.38G039800.1 Ceric.38G039800 substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.40 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre04.g217750 No alias No description available 0.04 OrthoFinder output from all 47 species
Ehy_g13247 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01028442001 No alias Transcription initiation factor TFIID subunit 5... 0.03 OrthoFinder output from all 47 species
Mp4g24010.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g16145 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Spa_g04434 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Zm00001e012730_P002 Zm00001e012730 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 331 355
IPR001680 WD40_repeat 173 206
IPR001680 WD40_repeat 273 308
IPR001680 WD40_repeat 370 402
No external refs found!