LOC_Os10g30200.1 (ASK1, ATSKP1, UIP1,...)

Aliases : ASK1, ATSKP1, UIP1, SKP1, SKP1A, LOC_Os10g30200

Description : target protein binding component SKP1/ASK1 of SKP1-CUL1-FBX (SCF) E3 ligase complexes

Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os10g30200.1

Target	Alias	Description	ECC score	Gene Family Method
Aob_g00969	ASK2, SKP1B	ASK-type linker component of SCF E3 ubiquitin ligase...	0.05	OrthoFinder output from all 47 species
Ceric.20G071100.1	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Dde_g09673	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ppi_g43896	ASK1, ATSKP1,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Zm00001e020533_P001	ASK2, SKP1B,...	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species
Zm00001e035984_P001	ASK1, ATSKP1,...	target protein binding component SKP1/ASK1 of...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	171	217
IPR016073	Skp1_comp_POZ	40	97

External Links

No external refs found!