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  5. LOC_Os10g29380.1

LOC_Os10g29380.1 (ATBPM3, BPM3, LOC_Os10g29380)


Aliases : ATBPM3, BPM3, LOC_Os10g29380

Description : BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana (sp|o22286|bpm3_arath : 215.0)


Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g29380.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Adi_g083226 BPM4, ATBPM4 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os06g45730.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.06 OrthoFinder output from all 47 species
LOC_Os10g29180.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.04 OrthoFinder output from all 47 species
LOC_Os10g29260.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.06 OrthoFinder output from all 47 species
LOC_Os10g29320.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.06 OrthoFinder output from all 47 species
Zm00001e005040_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.05 OrthoFinder output from all 47 species
Zm00001e006483_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e021927_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e030370_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.04 OrthoFinder output from all 47 species
Zm00001e030371_P001 ATBPM3, BPM3,... BTB/POZ and MATH domain-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e030372_P002 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.03 OrthoFinder output from all 47 species
Zm00001e033378_P002 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.04 OrthoFinder output from all 47 species
Zm00001e039614_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 188 301
IPR002083 MATH/TRAF_dom 49 153
No external refs found!