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  5. LOC_Os10g29180.1

LOC_Os10g29180.1 (ATBPM2, BPM2, LOC_Os10g29180)


Aliases : ATBPM2, BPM2, LOC_Os10g29180

Description : BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana (sp|q8l765|bpm1_arath : 248.0)


Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g29180.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g45730.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os10g28810.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.01 OrthoFinder output from all 47 species
LOC_Os10g29380.1 ATBPM3, BPM3,... BTB/POZ and MATH domain-containing protein 3... 0.04 OrthoFinder output from all 47 species
Zm00001e005040_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.07 OrthoFinder output from all 47 species
Zm00001e006483_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.04 OrthoFinder output from all 47 species
Zm00001e021927_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.05 OrthoFinder output from all 47 species
Zm00001e021929_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e030370_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.09 OrthoFinder output from all 47 species
Zm00001e030371_P001 ATBPM3, BPM3,... BTB/POZ and MATH domain-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e030372_P002 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.06 OrthoFinder output from all 47 species
Zm00001e033324_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.02 OrthoFinder output from all 47 species
Zm00001e033378_P002 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.07 OrthoFinder output from all 47 species
Zm00001e037751_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.01 OrthoFinder output from all 47 species
Zm00001e039614_P001 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 46 158
IPR000210 BTB/POZ_dom 192 299
No external refs found!