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Aliases : MGP, LOC_Os10g28330
Description : C2H2 zinc finger transcription factor
Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os10g28330.1 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G45260 | No alias | C2H2-like zinc finger protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G50700 | IDD2, AtIDD2 | indeterminate(ID)-domain 2 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g012802 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g07600 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g60888 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17401 | MGP | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g38909 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene68636.t1 | AtIDD7, IDD7,... | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene69376.t1 | IDD2, AtIDD2,... | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G010300.1 | IDD16, AtIDD16,... | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02301 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07601 | MGP | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0025.g009246 | JKD | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g098070.3.1 | IDD14, AtIDD14,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g008500.4.1 | IDD4, AtIDD4,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g007550.3.1 | JKD, Solyc09g007550 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g065670.3.1 | MGP, Solyc09g065670 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18185 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004751_P001 | AtIDD7, IDD7,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035365_P003 | MGP, Zm00001e035365 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041455_P002 | IDD4, AtIDD4,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0019321 | pentose metabolic process | IEP | HCCA |
| BP | GO:0019566 | arabinose metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0046373 | L-arabinose metabolic process | IEP | HCCA |
| MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |