1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g21404.1

LOC_Os10g21404.1 (NDHE, LOC_Os10g21404)


Aliases : NDHE, LOC_Os10g21404

Description : component NdhE of NDH membrane subcomplex M


Gene families : OG0008408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008408_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g21404.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
ATCG01070 NDHE NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 0.4 OrthoFinder output from all 47 species
ATMG00650 NAD4L NADH dehydrogenase subunit 4L 0.06 OrthoFinder output from all 47 species
Aev_g00289 NDHE component *(NdhE) of NDH membrane subcomplex M &... 0.42 OrthoFinder output from all 47 species
Cba_g04954 NDHE component *(NdhE) of NDH membrane subcomplex M &... 0.16 OrthoFinder output from all 47 species
Cba_g23996 NAD4L component *(ND4L/NQO11) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.05G044100.1 NDHE, Ceric.05G044100 not classified & original description: pacid=50578917... 0.13 OrthoFinder output from all 47 species
Ceric.05G045400.1 NDHE, Ceric.05G045400 not classified & original description: pacid=50577990... 0.13 OrthoFinder output from all 47 species
Ceric.05G046700.1 NDHE, Ceric.05G046700 component *(NdhE) of NDH membrane subcomplex M &... 0.2 OrthoFinder output from all 47 species
Ceric.16G017900.1 NDHE, Ceric.16G017900 not classified & original description: pacid=50589859... 0.29 OrthoFinder output from all 47 species
Ceric.18G053400.1 NDHE, Ceric.18G053400 not classified & original description: pacid=50621646... 0.29 OrthoFinder output from all 47 species
Ceric.35G068400.1 NDHE, Ceric.35G068400 not classified & original description: pacid=50581570... 0.29 OrthoFinder output from all 47 species
Cre09.g402552 NAD4L No description available 0.04 OrthoFinder output from all 47 species
Dcu_g12917 NDHE component *(NdhE) of NDH membrane subcomplex M &... 0.04 OrthoFinder output from all 47 species
Dde_g17101 NDHE component *(NdhE) of NDH membrane subcomplex M &... 0.07 OrthoFinder output from all 47 species
Gb_01748 NAD4L no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Gb_07150 NAD4L no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_07151 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g00487 NDHE component *(NdhE) of NDH membrane subcomplex M &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022092 NDHE not classified & original description: CDS=1-219 0.04 OrthoFinder output from all 47 species
Sam_g06769 No alias component *(ND4L/NQO11) of NADH dehydrogenase proton... 0.03 OrthoFinder output from all 47 species
Smo138426 No alias No description available 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR039428 NUOK/Mnh_C1-like 6 95
No external refs found!