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  5. LOC_Os10g21398.1

LOC_Os10g21398.1 (NDHI, LOC_Os10g21398)


Aliases : NDHI, LOC_Os10g21398

Description : component NdhI of NDH subcomplex A


Gene families : OG0009010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g21398.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
ATCG01090 NDHI NADPH dehydrogenases 0.35 OrthoFinder output from all 47 species
Aev_g16358 NDHI component *(NdhI) of NDH subcomplex A & original... 0.36 OrthoFinder output from all 47 species
Aob_g26428 NDHI component *(NdhI) of NDH subcomplex A & original... 0.14 OrthoFinder output from all 47 species
Ceric.05G044300.1 NDHI, Ceric.05G044300 component *(NdhI) of NDH subcomplex A & original... 0.08 OrthoFinder output from all 47 species
Ceric.05G045600.1 NDHI, Ceric.05G045600 component *(NdhI) of NDH subcomplex A & original... 0.13 OrthoFinder output from all 47 species
Ceric.09G082200.1 NDHI, Ceric.09G082200 component *(NdhI) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Ceric.18G053200.1 NDHI, Ceric.18G053200 component *(NdhI) of NDH subcomplex A & original... 0.09 OrthoFinder output from all 47 species
Ceric.35G068200.1 NDHI, Ceric.35G068200 component *(NdhI) of NDH subcomplex A & original... 0.09 OrthoFinder output from all 47 species
Dde_g03755 NDHI component *(NdhI) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species
GSVIVT01029923001 No alias NAD(P)H-quinone oxidoreductase subunit I, chloroplastic... 0.06 OrthoFinder output from all 47 species
Lfl_g00413 NDHI component *(NdhI) of NDH subcomplex A & original... 0.14 OrthoFinder output from all 47 species
Nbi_g00677 NDHI component *(NdhI) of NDH subcomplex A & original... 0.11 OrthoFinder output from all 47 species
Ore_g00623 NDHI component *(NdhI) of NDH subcomplex A & original... 0.22 OrthoFinder output from all 47 species
Pir_g18413 No alias component *(NdhI) of NDH subcomplex A & original... 0.19 OrthoFinder output from all 47 species
Pnu_g02634 NDHI component *(NdhI) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Sam_g21062 No alias component *(NdhI) of NDH subcomplex A & original... 0.14 OrthoFinder output from all 47 species
Smo137743 NDHI Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.11 OrthoFinder output from all 47 species
Solyc02g011780.3.1 NDHI, Solyc02g011780 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic... 0.27 OrthoFinder output from all 47 species
Solyc03g013615.1.1 NDHI, Solyc03g013615 component NdhI of NDH subcomplex A 0.29 OrthoFinder output from all 47 species
Solyc11g021220.2.1 NDHI, Solyc11g021220 component NdhI of NDH subcomplex A 0.29 OrthoFinder output from all 47 species
Tin_g24162 NDHI component *(NdhI) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 98 119
No external refs found!