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  5. LOC_Os10g20860.1

LOC_Os10g20860.1 (LOC_Os10g20860)


Aliases : LOC_Os10g20860

Description : Cortical cell-delineating protein OS=Zea mays (sp|q01595|ccdp_maize : 94.4)


Gene families : OG0000520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g20860.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Ehy_g14948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001296001 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota 0.02 OrthoFinder output from all 47 species
GSVIVT01001297001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01015895001 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
GSVIVT01027641001 No alias Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_33165 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g40460.1 LOC_Os10g40460 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ppi_g25284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63004 AIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g079230.1.1 Solyc08g079230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037901_P001 Zm00001e037901 Cortical cell-delineating protein OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e037906_P001 Zm00001e037906 Cortical cell-delineating protein OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e041767_P001 Zm00001e041767 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed_dom 56 133
No external refs found!