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  5. LOC_Os10g20770.1

LOC_Os10g20770.1 (LOC_Os10g20770)


Aliases : LOC_Os10g20770

Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g20770.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT5G45540 No alias Protein of unknown function (DUF594) 0.03 OrthoFinder output from all 47 species
Aspi01Gene04305.t1 Aspi01Gene04305 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G006000.1 Ceric.37G006000 not classified & original description: pacid=50616778... 0.03 OrthoFinder output from all 47 species
Dcu_g05813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014447001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01014456001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01015712001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os08g09570.1 LOC_Os08g09570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g08650.1 LOC_Os12g08650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g44467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g094650.3.1 Solyc12g094650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g32451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024441_P003 Zm00001e024441 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036718_P001 Zm00001e036718 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR007658 DUF594 657 707
IPR025315 DUF4220 49 393
No external refs found!