LOC_Os02g37430.1


Description : component Sm-D1 of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex


Gene families : OG_01_0004011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004011_tree ,
OG_02_0004085 (LandPlants) Phylogenetic Tree(s): OG_02_0004085_tree ,
OG_03_0004116 (SeedPlants) Phylogenetic Tree(s): OG_03_0004116_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g37430.1
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00127560 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
Cpa|evm.model.tig00000754.23 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.04 Archaeplastida
Cre16.g665400 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.04 Archaeplastida
GSVIVT01014776001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 Archaeplastida
Mp1g03900.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
Pp3c13_22270V3.1 No alias Small nuclear ribonucleoprotein family protein 0.02 Archaeplastida
Pp3c5_16280V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Pp3c9_610V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Solyc09g064660.4.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.02 Archaeplastida
AMTR_s00061p00127560 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 LandPlants
GSVIVT01014776001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 LandPlants
Mp1g03900.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 LandPlants
Pp3c13_22270V3.1 No alias Small nuclear ribonucleoprotein family protein 0.02 LandPlants
Pp3c5_16280V3.1 No alias Small nuclear ribonucleoprotein family protein 0.03 LandPlants
Solyc09g064660.4.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.02 LandPlants
Zm00001e007844_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e041053_P001 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.02 LandPlants
AMTR_s00061p00127560 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 SeedPlants
MA_466601g0010 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.01 SeedPlants
Solyc09g064660.4.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 5 69
No external refs found!