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  5. LOC_Os10g05990.1

LOC_Os10g05990.1 (LOC_Os10g05990)


Aliases : LOC_Os10g05990

Description : no hits & (original description: none)


Gene families : OG0009919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g05990.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00194550 evm_27.TU.AmTr_v1... Proline-rich protein 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT2G21140 PRP2, ATPRP2 proline-rich protein 2 0.07 OrthoFinder output from all 47 species
AT4G38770 ATPRP4, PRP4 proline-rich protein 4 0.06 OrthoFinder output from all 47 species
GSVIVT01024076001 ATPRP4, PRP4 Proline-rich protein 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01024079001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_37950 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g05750.1 ATPRP4, PRP4,... no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10435425g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_358712g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g054900.2.1 Solyc10g054900 Proline-rich protein 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e002652_P001 ATPRP4, PRP4,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038589_P001 Zm00001e038589 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038590_P001 ATPRP4, PRP4,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!