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  5. LOC_Os09g39750.1

LOC_Os09g39750.1 (LOC_Os09g39750)


Aliases : LOC_Os09g39750

Description : no hits & (original description: none)


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g39750.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00133150 evm_27.TU.AmTr_v1... Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g041418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08984.t1 Aspi01Gene08984 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046319 No alias not classified & original description: CDS=53-2212 0.05 OrthoFinder output from all 47 species
Cba_g14488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G080300.1 Ceric.23G080300 not classified & original description: pacid=50610288... 0.03 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016603001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
LOC_Os01g74370.1 LOC_Os01g74370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g26714 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g27935 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010278 No alias not classified & original description: CDS=116-3175 0.04 OrthoFinder output from all 47 species
Sam_g17807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000820_P002 Zm00001e000820 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e028781_P001 Zm00001e028781 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 38 428
No external refs found!