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  5. LOC_Os09g39550.1

LOC_Os09g39550.1 (LOC_Os09g39550)


Aliases : LOC_Os09g39550

Description : no hits & (original description: none)


Gene families : OG0002870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g39550.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00191190 evm_27.TU.AmTr_v1... Uncharacterized protein At2g27730, mitochondrial... 0.04 OrthoFinder output from all 47 species
Ala_g05534 No alias component *(P2) of NADH dehydrogenase complex & original... 0.04 OrthoFinder output from all 47 species
Dde_g50327 No alias component *(P2) of NADH dehydrogenase complex & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0160.g023868 No alias component *(Tim8) of inner mitochondrion membrane TIM22... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0203.g025653 No alias component *(P2) of NADH dehydrogenase complex & original... 0.02 OrthoFinder output from all 47 species
Sam_g20485 No alias component *(P2) of NADH dehydrogenase complex & original... 0.02 OrthoFinder output from all 47 species
Solyc05g055250.2.1 Solyc05g055250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g01245 No alias component *(P2) of NADH dehydrogenase complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e019590_P001 Zm00001e019590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!