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Aliases : LOC_Os09g39270
Description : component Pcf11 of Cleavage Factor II (CF-IIm) complex
Gene families : OG0001185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001185_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00040p00210200 | evm_27.TU.AmTr_v1... | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00062p00031880 | PCFS4,... | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G36480 | No alias | ENTH/VHS family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g019422 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g028535 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g050902 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060938 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18258 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18266 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10884 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g32504 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g60779 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04503 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13602 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g22117 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g31315 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene70308.t1 | Aspi01Gene70308 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G047300.1 | Ceric.04G047300 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.20G037600.1 | Ceric.20G037600 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.39G023900.1 | PCFS4, Ceric.39G023900 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.39G024000.1 | Ceric.39G024000 | not classified & original description: pacid=50583322... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000396.25 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000396.26 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g09800 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.11 | OrthoFinder output from all 47 species | |
| Ehy_g07114 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07144 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g32334 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012646001 | PCFS4 | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01033783001 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage Factor... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_21315 | PCFS4 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.06 | OrthoFinder output from all 47 species | |
| Gb_26268 | PCFS4 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.09 | OrthoFinder output from all 47 species | |
| Len_g08651 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g11409 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g16594 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10040687g0010 | PCFS4 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.06 | OrthoFinder output from all 47 species | |
| MA_10433250g0020 | PCFS4 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.06 | OrthoFinder output from all 47 species | |
| MA_132868g0010 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.07 | OrthoFinder output from all 47 species | |
| Mp8g18940.1 | No alias | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g31704 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g08557 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g13187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43016 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g02318 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g24250 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g31624 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08449 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g57483 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012185 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015402 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29724 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g009120.4.1 | Solyc09g009120 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.1 | OrthoFinder output from all 47 species | |
| Solyc10g083590.2.1 | Solyc10g083590 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.09 | OrthoFinder output from all 47 species | |
| Solyc12g094490.2.1 | PCFS4, Solyc12g094490 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04862 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05766 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g48755 | No alias | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06139 | PCFS4 | component *(Pcf11) of Cleavage Factor II (CF-IIm)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009485_P001 | Zm00001e009485 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e021648_P002 | PCFS4, Zm00001e021648 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e033620_P001 | Zm00001e033620 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e039948_P002 | PCFS4, Zm00001e039948 | component Pcf11 of Cleavage Factor II (CF-IIm) complex | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |