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  5. LOC_Os09g38790.1

LOC_Os09g38790.1 (SUF4, LOC_Os09g38790)


Aliases : SUF4, LOC_Os09g38790

Description : C2H2 zinc finger transcription factor


Gene families : OG0002334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g38790.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256770 SUF4,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT1G30970 SUF4 zinc finger (C2H2 type) family protein 0.02 OrthoFinder output from all 47 species
Adi_g104399 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Als_g54932 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Als_g58747 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Aob_g11141 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Cba_g25906 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Cre06.g305200 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 OrthoFinder output from all 47 species
Dac_g13021 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Dcu_g22754 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.05 OrthoFinder output from all 47 species
Dcu_g23742 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
GSVIVT01012145001 SUF4 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_39703 SUF4 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Lfl_g12714 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.04 OrthoFinder output from all 47 species
MA_10435270g0010 SUF4 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Mp4g13860.1 SUF4 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Nbi_g26521 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Ore_g03322 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Pir_g07069 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.02 OrthoFinder output from all 47 species
Ppi_g12837 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.05 OrthoFinder output from all 47 species
Spa_g16449 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Tin_g23103 SUF4 FLC-binding component *(SUF4) of FRI-C transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e010342_P005 SUF4, Zm00001e010342 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!