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  5. LOC_Os09g37050.1

LOC_Os09g37050.1 (NIP2, LOC_Os09g37050)


Aliases : NIP2, LOC_Os09g37050

Description : NEP1-interacting protein 1 OS=Arabidopsis thaliana (sp|q8gt75|nip1_arath : 130.0)


Gene families : OG0001320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g37050.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G17730 NIP2 NEP-interacting protein 2 0.06 OrthoFinder output from all 47 species
AT4G35840 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g01022 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g15552 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001577 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g05673 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g03714 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g06734 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g03855 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dcu_g13182 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os06g50370.1 LOC_Os06g50370 NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g09603 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g10252 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_119038g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g06043 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g24955 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g10027 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g15444 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pnu_g11731 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g45762 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025140 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc02g083400.3.1 NIP2, Solyc02g083400 NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g50999 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g56954 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g03831 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 167 210
No external refs found!