1. Homeraph">
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os09g36770.3

LOC_Os09g36770.3 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB, LOC_Os09g36770

Description : endoplasmic reticulum-plasma membrane tethering protein (SYTa/b/c)


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g36770.3

Target Alias Description ECC score Gene Family Method Actions
Adi_g002005 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36035 NTMC2T1.2, SYTB,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47625.t1 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.04 OrthoFinder output from all 47 species
Cba_g02633 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Ceric.01G110500.1 NTMC2TYPE4,... not classified & original description: pacid=50591328... 0.03 OrthoFinder output from all 47 species
Gb_20864 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species
Len_g00613 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10162068g0010 NTMC2TYPE1.1,... Synaptotagmin-1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pnu_g26705 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017940 NTMC2TYPE4, NTMC2T4 not classified & original description: CDS=34-1614 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018190 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Spa_g17967 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Spa_g38604 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 67 248
IPR000008 C2_dom 260 357
IPR000008 C2_dom 420 522
No external refs found!