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  5. LOC_Os09g36140.1

LOC_Os09g36140.1 (TEL1, LOC_Os09g36140)


Aliases : TEL1, LOC_Os09g36140

Description : Protein MEI2-like 6 OS=Oryza sativa subsp. japonica (sp|q652k6|oml6_orysj : 478.0)


Gene families : OG0003402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g36140.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00120470 TEL1,... Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.11 OrthoFinder output from all 47 species
AT1G67770 TEL2 terminal EAR1-like 2 0.1 OrthoFinder output from all 47 species
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.08 OrthoFinder output from all 47 species
Aspi01Gene40898.t1 TEL1, Aspi01Gene40898 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G063900.1 TEL1, Ceric.21G063900 not classified & original description: pacid=50602943... 0.04 OrthoFinder output from all 47 species
Ceric.39G026900.1 TEL1, Ceric.39G026900 not classified & original description: pacid=50582960... 0.04 OrthoFinder output from all 47 species
Dcu_g18906 TEL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003988001 TEL1 Protein terminal ear1 OS=Zea mays 0.04 OrthoFinder output from all 47 species
GSVIVT01008932001 MCT1 Protein terminal ear1 homolog OS=Oryza sativa subsp. indica 0.05 OrthoFinder output from all 47 species
Gb_20291 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_21853 TEL1 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 205.0) 0.03 OrthoFinder output from all 47 species
MA_477594g0010 TEL1 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006958 TEL1 not classified & original description: CDS=1-1983 0.03 OrthoFinder output from all 47 species
Solyc01g110200.2.1 MCT2, Solyc01g110200 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species
Solyc05g013930.2.1 TEL1, Solyc05g013930 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 355.0) 0.05 OrthoFinder output from all 47 species
Solyc05g056360.2.1 MCT1, Solyc05g056360 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.1 OrthoFinder output from all 47 species
Zm00001e018912_P001 TEL1, Zm00001e018912 Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.14 OrthoFinder output from all 47 species
Zm00001e025198_P001 TEL1, Zm00001e025198 Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 214 283
No external refs found!