LOC_Os09g35760.1 (HDG1, HD-GL2-1, LOC_Os09g35760)


Aliases : HDG1, HD-GL2-1, LOC_Os09g35760

Description : transcription factor (HD-ZIP IV)


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g35760.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00265170 PDF2,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00231210 ANL2, AHDP RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00091460 ANL2, AHDP RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
AT1G05230 HDG2 homeodomain GLABROUS 2 0.06 OrthoFinder output from all 47 species
AT1G34650 HDG10 homeodomain GLABROUS 10 0.03 OrthoFinder output from all 47 species
AT1G79840 GL2 HD-ZIP IV family of homeobox-leucine zipper protein with... 0.03 OrthoFinder output from all 47 species
AT4G04890 PDF2 protodermal factor 2 0.05 OrthoFinder output from all 47 species
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.04 OrthoFinder output from all 47 species
AT4G25530 HDG6, FWA FLOWERING WAGENINGEN 0.03 OrthoFinder output from all 47 species
Aev_g05536 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06757 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05720 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07199 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02216 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08452 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09754 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14038 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64351.t1 PDF2, Aspi01Gene64351 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69127.t1 PDF2, Aspi01Gene69127 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0042.g026870 PDF2 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035524 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0100.g044331 PDF2 HD-ZIP IV-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049156 PDF2 HD-ZIP IV-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.1Z119300.1 HDG2, Ceric.1Z119300 HD-ZIP IV-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.29G064400.1 ATML1, Ceric.29G064400 HD-ZIP IV-type transcription factor & original... 0.09 OrthoFinder output from all 47 species
Dac_g03815 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14759 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08292 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11376 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15269 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25466 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05023 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06153 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20385 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013073001 HDG5, HB-7 RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
GSVIVT01029396001 EDT1, HDG11, ATHDG11 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Gb_18862 PDF2 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Len_g03368 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11571 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10318273g0010 HDG2 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
MA_10374232g0010 PDF2 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
MA_103885g0010 ATML1 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
MA_110607g0010 PDF2 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
MA_122121g0010 PDF2 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
MA_16767g0010 PDF2 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
MA_17048g0010 HDG5, HB-7 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
MA_38472g0010 HDG1, HD-GL2-1 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
MA_8859629g0010 PDF2 transcription factor (HD-ZIP IV) 0.06 OrthoFinder output from all 47 species
Mp7g09710.1 ATML1 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Msp_g30518 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13220 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13790 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11149 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31588 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11364 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11487 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g08965 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17562 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001922 ATML1 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006777 ATML1 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016693 PDF2 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026541 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g12326 No alias HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g098200.4.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Solyc03g120620.3.1 GL2, Solyc03g120620 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Solyc06g072310.3.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.06 OrthoFinder output from all 47 species
Solyc08g076370.3.1 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Solyc09g015110.2.1 Solyc09g015110 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g005830.3.1 PDF2, Solyc12g005830 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Spa_g16174 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46298 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51145 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11470 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31372 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002453_P001 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Zm00001e006870_P004 HDG2, Zm00001e006870 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Zm00001e017088_P001 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.1 OrthoFinder output from all 47 species
Zm00001e019597_P001 PDF2, Zm00001e019597 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Zm00001e021649_P002 PDF2, Zm00001e021649 transcription factor (HD-ZIP IV) 0.06 OrthoFinder output from all 47 species
Zm00001e023786_P003 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Zm00001e034755_P001 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.08 OrthoFinder output from all 47 species
Zm00001e036212_P002 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Zm00001e039947_P001 HDG2, Zm00001e039947 transcription factor (HD-ZIP IV) 0.08 OrthoFinder output from all 47 species
Zm00001e040312_P001 PDF2, Zm00001e040312 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Zm00001e042218_P002 HDG2, Zm00001e042218 transcription factor (HD-ZIP IV) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 123 179
IPR002913 START_lipid-bd_dom 349 579
No external refs found!