LOC_Os09g35680.1 (AtPP2-A13, PP2-A13,...)


Aliases : AtPP2-A13, PP2-A13, LOC_Os09g35680

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g35680.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00203100 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g014584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08542 PP2-A15, AtPP2-A15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04871 AtPP2-B7, PP2-B7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58763 PP2-A15, AtPP2-A15 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05608 AtPP2-A13, PP2-A13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064518 No alias not classified & original description: CDS=191-1105 0.03 OrthoFinder output from all 47 species
Azfi_s2399.g111181 No alias not classified & original description: CDS=192-1106 0.03 OrthoFinder output from all 47 species
Cba_g09552 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G068200.1 Ceric.16G068200 not classified & original description: pacid=50588941... 0.02 OrthoFinder output from all 47 species
Dcu_g21011 ATPP2-B11, PP2-B11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019353001 ATPP2-A4, PP2-A4 Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g07053 PP2-A15, AtPP2-A15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08804 AtPP2-B8, PP2-B8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40077 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39207 AtPP2-B1, PP2-B1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44753 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002864 No alias not classified & original description: CDS=373-1245 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017743 PP2-A15, AtPP2-A15 not classified & original description: CDS=224-1150 0.03 OrthoFinder output from all 47 species
Smo271662 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Solyc01g100000.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g069030.3.1 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g13563 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g41948 PP2-B4, AtPP2-B4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002143_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species
Zm00001e023222_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Zm00001e024648_P001 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034748_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 116 274
IPR001810 F-box_dom 21 59
No external refs found!