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  5. LOC_Os09g34910.1

LOC_Os09g34910.1 (PRH75, LOC_Os09g34910)


Aliases : PRH75, LOC_Os09g34910

Description : DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica (sp|q650t9|rh7_orysj : 1041.0)


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g34910.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00233780 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g11630 PRH75 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08480 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0052.g031680 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020734.25 PMH2, ATRH53 DEAD-box ATP-dependent RNA helicase 53, mitochondrial... 0.01 OrthoFinder output from all 47 species
Cre02.g118300 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Cre17.g727700 emb1138 DEAD-box ATP-dependent RNA helicase 3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Smo99603 emb1138 DEAD-box ATP-dependent RNA helicase 3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc06g035450.4.1 PRH75, Solyc06g035450 DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia... 0.06 OrthoFinder output from all 47 species
Solyc07g044760.3.1 PMH2, ATRH53,... RNA helicase (PMH) 0.02 OrthoFinder output from all 47 species
Tin_g39635 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e010187_P002 PRH75, Zm00001e010187 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e034728_P002 PRH75, Zm00001e034728 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012562 GUCT 550 645
IPR011545 DEAD/DEAH_box_helicase_dom 139 317
IPR001650 Helicase_C 360 460
No external refs found!