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  5. LOC_Os09g34880.1

LOC_Os09g34880.1 (LOC_Os09g34880)


Aliases : LOC_Os09g34880

Description : transcription factor (bZIP)


Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g34880.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g016089 No alias bZIP class-L transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49064.t1 Aspi01Gene49064 bZIP class-L transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62983 ATBZIP34, BZIP34 bZIP class-L transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04714 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024160001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
Mp3g00600.1 No alias transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Msp_g01666 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02078 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12096 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g110480.4.1 Solyc01g110480 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Spa_g39970 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000201_P001 Zm00001e000201 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e019777_P001 ATBZIP61,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e024638_P002 SUE3, VIP1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e029031_P001 ATBZIP61,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e034725_P002 Zm00001e034725 transcription factor (bZIP) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 314 365
No external refs found!