LOC_Os09g32274.1 (LOC_Os09g32274)


Aliases : LOC_Os09g32274

Description : component mtRPS16 of small ribosomal subunit proteome


Gene families : OG0002911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002911_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g32274.1

Target Alias Description ECC score Gene Family Method Actions
AT5G56940 No alias Ribosomal protein S16 family protein 0.19 OrthoFinder output from all 47 species
Adi_g010764 No alias component *(bS16m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cre12.g494450 No alias 30S ribosomal protein S16, chloroplastic OS=Staurastrum... 0.02 OrthoFinder output from all 47 species
MA_4773g0010 No alias component mtRPS16 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g25285 No alias component *(bS16m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032299 ribonuclease H2 complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR000307 Ribosomal_S16 9 70
No external refs found!