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  5. LOC_Os09g32220.1

LOC_Os09g32220.1 (LOC_Os09g32220)


Aliases : LOC_Os09g32220

Description : no hits & (original description: none)


Gene families : OG0006364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g32220.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00182870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G12590 No alias Protein of unknown function DUF106, transmembrane 0.1 OrthoFinder output from all 47 species
Adi_g016162 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g02829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035652 No alias not classified & original description: CDS=95-850 0.03 OrthoFinder output from all 47 species
Ceric.10G075500.1 Ceric.10G075500 not classified & original description: pacid=50613374... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.133 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre09.g400400 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g08018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_2494g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g01850.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Sam_g06612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g054100.3.1 Solyc05g054100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g11110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010090_P001 Zm00001e010090 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
CC GO:0030176 obsolete integral component of endoplasmic reticulum membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002809 EMC3/TMCO1 4 195
No external refs found!