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  5. LOC_Os09g31160.1

LOC_Os09g31160.1 (GLR3.3, ATGLR3.3,...)


Aliases : GLR3.3, ATGLR3.3, LOC_Os09g31160

Description : ligand-gated cation channel (GLR)


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g31160.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00181830 GLR2.1,... Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00183450 GLR2.2,... Solute transport.channels.GLR ligand-gated cation channel 0.06 OrthoFinder output from all 47 species
AMTR_s00021p00176450 ATGLR2.9,... Solute transport.channels.GLR ligand-gated cation channel 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00244390 GLR2.7,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
Adi_g036165 ATGLR3.2,... ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14350 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G008300.1 GLUR3, GLR3.4,... ligand-gated cation channel *(GLR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.23G025600.1 GLR3.3,... ligand-gated cation channel *(GLR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.35G032600.1 ATGLR3.1, GLR2,... ligand-gated cation channel *(GLR) & original... 0.03 OrthoFinder output from all 47 species
Dde_g18803 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_37580g0010 ATGLR3.1, GLR2,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_391859g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
MA_958834g0010 ATGLR3.2,... ligand-gated cation channel (GLR) 0.02 OrthoFinder output from all 47 species
Ore_g29926 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09957 GLUR3, GLR3.4, ATGLR3.4 ligand-gated cation channel *(GLR) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!