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  5. LOC_Os09g30506.1

LOC_Os09g30506.1 (LOC_Os09g30506)


Aliases : LOC_Os09g30506

Description : no hits & (original description: none)


Gene families : OG0001759 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g30506.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene12704.t1 Aspi01Gene12704 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66532.t1 Aspi01Gene66532 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66533.t1 Aspi01Gene66533 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66534.t1 Aspi01Gene66534 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66535.t1 Aspi01Gene66535 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66536.t1 Aspi01Gene66536 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66539.t1 Aspi01Gene66539 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66541.t1 Aspi01Gene66541 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66542.t1 Aspi01Gene66542 SRC2-clade calcium sensor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G032500.1 Ceric.11G032500 SRC2-clade calcium sensor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G032800.1 Ceric.11G032800 SRC2-clade calcium sensor & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os03g29770.1 LOC_Os03g29770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g04360.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g031630.3.1 Solyc03g031630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g51046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 28 99
No external refs found!