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  5. LOC_Os09g30280.1

LOC_Os09g30280.1 (GAUT4, LOC_Os09g30280)


Aliases : GAUT4, LOC_Os09g30280

Description : Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana (sp|q93zx7|gaut4_arath : 720.0)


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g30280.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0064.g035633 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Dde_g16416 LGT1, GAUT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_118216g0010 GAUT7, LGT7 component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.02 OrthoFinder output from all 47 species
Nbi_g01316 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Sam_g10411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 369 680
No external refs found!