1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os09g27340.1

LOC_Os09g27340.1 (LOC_Os09g27340)


Aliases : LOC_Os09g27340

Description : AAA-ATPase At5g57480 OS=Arabidopsis thaliana (sp|q9fkm3|aatpk_arath : 308.0)


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g27340.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00244740 evm_27.TU.AmTr_v1... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00036p00176790 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 OrthoFinder output from all 47 species
AT4G30250 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G17730 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 OrthoFinder output from all 47 species
Adi_g077316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12634.t1 Aspi01Gene12634 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12635.t1 Aspi01Gene12635 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30040.t1 Aspi01Gene30040 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51124.t1 Aspi01Gene51124 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011534 No alias not classified & original description: CDS=1-1398 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015858 No alias not classified & original description: CDS=1-1575 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034525 No alias not classified & original description: CDS=1-2166 0.04 OrthoFinder output from all 47 species
Cba_g04601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G084000.1 Ceric.06G084000 not classified & original description: pacid=50619247... 0.03 OrthoFinder output from all 47 species
Ceric.19G071600.1 Ceric.19G071600 not classified & original description: pacid=50575855... 0.04 OrthoFinder output from all 47 species
Dac_g09976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001352001 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01010368001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01029545001 No alias AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_02166 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27546 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_34238 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os03g38800.1 LOC_Os03g38800 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os06g48250.1 LOC_Os06g48250 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g44190.1 AATP1, LOC_Os12g44190 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g40369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10067279g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10285593g0010 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10435468g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_165229g0020 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_354684g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_354707g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_69227g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g04440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002692 No alias not classified & original description: CDS=1-1494 0.03 OrthoFinder output from all 47 species
Smo407065 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc02g084900.2.1 Solyc02g084900 AAA-ATPase At2g18193 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g087540.3.1 Solyc02g087540 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g007280.4.1 BCS1, Solyc10g007280 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g26231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003357_P001 AATP1, Zm00001e003357 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e006040_P001 AATP1, Zm00001e006040 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e012527_P001 Zm00001e012527 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e020637_P001 BCS1, Zm00001e020637 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e027961_P001 Zm00001e027961 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034224_P001 Zm00001e034224 AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 21 136
IPR003959 ATPase_AAA_core 249 399
No external refs found!