1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os09g26730.1

LOC_Os09g26730.1 (CPN21, ATCPN21,...)


Aliases : CPN21, ATCPN21, CHCPN10, CPN10, CPN20, LOC_Os09g26730

Description : CPN20 auxiliary co-chaperone involved in RuBisCo assembly. Hsp60-co-chaperone (Hsp20)


Gene families : OG0002061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002061_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g26730.1

Target Alias Description ECC score Gene Family Method Actions
AT5G20720 CPN21, ATCPN21,... chaperonin 20 0.05 OrthoFinder output from all 47 species
Adi_g006865 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g04528 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g08115 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G021600.1 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description:... 0.06 OrthoFinder output from all 47 species
Cre08.g358562 CPN21, ATCPN21,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cre12.g505850 CPN21, ATCPN21,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Dcu_g09096 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13054 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015036001 CPN21, ATCPN21,... External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
Len_g05704 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09535 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02678 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g10057 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13632 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004459 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: CDS=1-741 0.05 OrthoFinder output from all 47 species
Sam_g19651 No alias Hsp60-co-chaperone *(Hsp20) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g45373 No alias Hsp60-co-chaperone *(Hsp20) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g042250.3.1 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.08 OrthoFinder output from all 47 species
Spa_g05328 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12433 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17719 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g29973 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11622 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023757_P002 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 153 243
IPR020818 Chaperonin_GroES 55 144
No external refs found!