LOC_Os09g26260.1 (LOC_Os09g26260)

Aliases : LOC_Os09g26260

Description : AAA-ATPase At5g57480 OS=Arabidopsis thaliana (sp|q9fkm3|aatpk_arath : 590.0)

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g26260.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.01	OrthoFinder output from all 47 species
AT4G30250	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.01	OrthoFinder output from all 47 species
Als_g06267	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g52993	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17832	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g36232	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os07g09490.1	AATP1, LOC_Os07g09490	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Nbi_g11731	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g28405	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09594	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g082640.3.1	Solyc03g082640	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e033043_P001	Zm00001e033043	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Zm00001e034224_P001	Zm00001e034224	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Zm00001e035111_P001	BCS1, Zm00001e035111	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	26	119
IPR003959	ATPase_AAA_core	242	302

External Links

No external refs found!

LOC_Os09g26260.1 (LOC_Os09g26260)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation