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Aliases : LOC_Os09g25550
Description : Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana (sp|o65567|pp342_arath : 878.0)
Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G30825 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016371 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g01555 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01078 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene09212.t1 | Aspi01Gene09212 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12627 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G065200.1 | Ceric.19G065200 | not classified & original description: pacid=50576378... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06462 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g20213 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03993 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06104 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12313 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_187850g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g07710.1 | No alias | Pentatricopeptide repeat-containing protein At4g30825,... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g10407 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g19610 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g36090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16608 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012097 | No alias | not classified & original description: CDS=661-1995 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0149.g023267 | No alias | not classified & original description: CDS=111-2933 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13761 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25071 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e040095_P002 | Zm00001e040095 | Pentatricopeptide repeat-containing protein At4g30825,... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004807 | triose-phosphate isomerase activity | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008374 | O-acyltransferase activity | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 889 | 936 |
| IPR002885 | Pentatricopeptide_repeat | 823 | 864 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 448 |
| IPR002885 | Pentatricopeptide_repeat | 300 | 329 |
| IPR002885 | Pentatricopeptide_repeat | 753 | 782 |
| IPR002885 | Pentatricopeptide_repeat | 648 | 674 |
| IPR002885 | Pentatricopeptide_repeat | 374 | 398 |
| IPR002885 | Pentatricopeptide_repeat | 613 | 642 |
| IPR002885 | Pentatricopeptide_repeat | 787 | 817 |
| IPR002885 | Pentatricopeptide_repeat | 543 | 566 |
| IPR002885 | Pentatricopeptide_repeat | 719 | 747 |
| IPR002885 | Pentatricopeptide_repeat | 477 | 503 |
| IPR002885 | Pentatricopeptide_repeat | 579 | 604 |
| No external refs found! |