1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os09g25050.1

LOC_Os09g25050.1 (LOC_Os09g25050)


Aliases : LOC_Os09g25050

Description : Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana (sp|q9flj4|pp440_arath : 347.0)


Gene families : OG0040299 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g25050.1
Cluster HCCA: Cluster_128


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 141 168
IPR002885 Pentatricopeptide_repeat 482 510
IPR002885 Pentatricopeptide_repeat 378 409
IPR002885 Pentatricopeptide_repeat 241 290
IPR002885 Pentatricopeptide_repeat 311 360
IPR002885 Pentatricopeptide_repeat 528 575
IPR002885 Pentatricopeptide_repeat 171 219
IPR002885 Pentatricopeptide_repeat 416 462
No external refs found!