LOC_Os09g24650.2 (LOC_Os09g24650)

Aliases : LOC_Os09g24650

Description : RING-v-class E3 ligase

Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g24650.2

Target	Alias	Description	ECC score	Gene Family Method
Adi_g085549	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000908	No alias	E3 ubiquitin ligase & original description: CDS=1-1032	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g010979	No alias	E3 ubiquitin ligase & original description: CDS=450-1109	0.02	OrthoFinder output from all 47 species
Zm00001e025697_P001	Zm00001e025697	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022143	DUF3675	114	227
IPR011016	Znf_RING-CH	62	107

External Links

No external refs found!