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  5. LOC_Os09g24490.1

LOC_Os09g24490.1 (LOC_Os09g24490)


Aliases : LOC_Os09g24490

Description : transcription factor (bHLH)


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g24490.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00150740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene19449.t1 Aspi01Gene19449 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13418 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011960001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
MA_10157g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc04g076240.3.1 Solyc04g076240 transcription factor (bHLH) 0.08 OrthoFinder output from all 47 species
Solyc05g009880.3.1 Solyc05g009880 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc06g051260.4.1 Solyc06g051260 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc10g078380.2.1 Solyc10g078380 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e001119_P001 Zm00001e001119 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e009812_P001 Zm00001e009812 transcription factor (bHLH) 0.09 OrthoFinder output from all 47 species
Zm00001e009972_P001 Zm00001e009972 transcription factor (bHLH) 0.09 OrthoFinder output from all 47 species
Zm00001e034395_P001 Zm00001e034395 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Zm00001e038535_P001 Zm00001e038535 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 108 155
No external refs found!