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  5. LOC_Os09g24480.1

LOC_Os09g24480.1 (BRC1, ATTCP18, TCP18,...)


Aliases : BRC1, ATTCP18, TCP18, LOC_Os09g24480

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g24480.1

Target Alias Description ECC score Gene Family Method Actions
AT3G18550 BRC1, ATTCP18, TCP18 TCP family transcription factor 0.02 OrthoFinder output from all 47 species
Aev_g07355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16756 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02912.t1 ATTCP24, TCP24,... TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27741.t1 TCP2, Aspi01Gene27741 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007839 TCP5 TCP-type transcription factor & original description: CDS=1-1389 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012107 ATTCP24, TCP24 TCP-type transcription factor & original description: CDS=1-672 0.04 OrthoFinder output from all 47 species
Cba_g22010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37950 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46638 TCP2 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008234001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
GSVIVT01036449001 TCP1 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
Gb_07891 ATTCP24, TCP24 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Gb_30049 TCP2 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Gb_38379 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g07001 TCP10 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_189502g0010 ATTCP24, TCP24 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Msp_g48155 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11290 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077250.2.1 TCP4, MEE35,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc07g053410.4.1 TCP4, MEE35,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e004148_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e005407_P001 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e022442_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 77 156
No external refs found!