- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os09g20550
Description : MND1-interacting protein 1 OS=Arabidopsis thaliana (sp|q8rx22|mip1_arath : 208.0)
Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os09g20550.1 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g105268 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01005 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g47717 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g17294 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene31036.t1 | Aspi01Gene31036 | E3 ubiquitin ligase *(PIR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g03269 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g17138 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g20665 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g05341 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01013185001 | No alias | MND1-interacting protein 1 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g38870 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20727 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g080430.4.1 | Solyc01g080430 | Putative E3 ubiquitin-protein ligase RF298... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12679 | No alias | E3 ubiquiTin ligase *(PIR) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004635 | phosphoribosyl-AMP cyclohydrolase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006547 | histidine metabolic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019238 | cyclohydrolase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |