LOC_Os02g34570.1


Description : component RRP45 of exosome EXO9 core complex


Gene families : OG_01_0004603 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004603_tree ,
OG_02_0005297 (LandPlants) Phylogenetic Tree(s): OG_02_0005297_tree ,
OG_03_0006256 (SeedPlants) Phylogenetic Tree(s): OG_03_0006256_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g34570.1
Cluster HCCA: Cluster_380

Target Alias Description ECC score Gene Family Method Actions
AT3G60500 CER7, G3 3'-5'-exoribonuclease family protein 0.09 Archaeplastida
Cpa|evm.model.tig00020780.29 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.02 Archaeplastida
Cre03.g175000 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.11 Archaeplastida
GSVIVT01034501001 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 Archaeplastida
Gb_25376 No alias component RRP45 of exosome EXO9 core complex 0.07 Archaeplastida
Mp1g03430.1 No alias component RRP45 of exosome EXO9 core complex 0.04 Archaeplastida
Pp3c15_10030V3.1 No alias 3\-5\-exoribonuclease family protein 0.02 Archaeplastida
Solyc05g047420.4.1 No alias component RRP45 of exosome EXO9 core complex 0.07 Archaeplastida
Zm00001e014785_P004 No alias No annotation 0.04 Archaeplastida
AT3G60500 CER7, G3 3'-5'-exoribonuclease family protein 0.08 LandPlants
GSVIVT01034501001 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 LandPlants
Gb_25376 No alias component RRP45 of exosome EXO9 core complex 0.07 LandPlants
Mp1g03430.1 No alias component RRP45 of exosome EXO9 core complex 0.02 LandPlants
Pp3c15_10030V3.1 No alias 3\-5\-exoribonuclease family protein 0.02 LandPlants
Solyc05g047420.4.1 No alias component RRP45 of exosome EXO9 core complex 0.07 LandPlants
Zm00001e014785_P004 No alias No annotation 0.04 LandPlants
AT3G60500 CER7, G3 3'-5'-exoribonuclease family protein 0.08 SeedPlants
GSVIVT01034501001 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 SeedPlants
Gb_25376 No alias component RRP45 of exosome EXO9 core complex 0.06 SeedPlants
Solyc05g047420.4.1 No alias component RRP45 of exosome EXO9 core complex 0.06 SeedPlants
Zm00001e014785_P004 No alias No annotation 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 35 166
IPR015847 ExoRNase_PH_dom2 195 261
No external refs found!